Paket: pizzly (0.37.3+ds-9 ve diğerleri)

pizzly için bağlantılar

Debian Kaynakları:

pizzly Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

Identifies gene fusions in RNA sequencing data

For the interpretation of the transcriptome (the abundance and sequence of RNA) of tomour cells one is particularly interested in transcripts that cannot be mapped to single genes but that are seen to be fused as parts from two genes. Likely eplanations are chromosomal translocations.

Pizzly can identify novel such peculiarities, building on interpretations on variable splicing by the tool kallisto. Both tools are elements of the bcbio workflow.

pizzly ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: kallisto

near-optimal RNA-Seq quantification
dep: libc6 (>= 2.34) [alpha, ia64, sh4 değil]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.36) [sh4]
dep: libc6.1 (>= 2.34) [alpha]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

dep: libc6.1 (>= 2.36) [ia64]
dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, x32]

GCC support library

dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4]

dep: libgcc-s1 (>= 4.2) [ia64]

dep: libgcc-s1 (>= 4.3) [sparc64]
dep: libgcc-s2 (>= 4.2.1) [m68k]

GCC support library
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC support library
dep: libstdc++6 (>= 12) [alpha, ia64, m68k, riscv64, sh4, sparc64 değil]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 12.2.0-12) [ia64, m68k, sparc64]

dep: libstdc++6 (>= 12.2.0-9) [alpha, sh4]

dep: libstdc++6 (>= 13.1) [riscv64]
dep: libunwind8 [ia64]

library to determine the call-chain of a program - runtime
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

rec: python3-h5py

general-purpose Python interface to hdf5

pizzly indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	0.37.3+ds-9	271,7 kB	1.059,0 kB	[dosya listesi]
amd64	0.37.3+ds-9	285,5 kB	864,0 kB	[dosya listesi]
arm64	0.37.3+ds-9	248,9 kB	864,0 kB	[dosya listesi]
hppa (resmi olmayan port)	0.37.3+ds-9	268,7 kB	819,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	0.37.3+ds-9	342,3 kB	1.558,0 kB	[dosya listesi]
m68k (resmi olmayan port)	0.37.3+ds-9	258,3 kB	815,0 kB	[dosya listesi]
mips64el	0.37.3+ds-9	246,3 kB	962,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	0.37.3+ds-9	280,6 kB	1.056,0 kB	[dosya listesi]
ppc64el	0.37.3+ds-9	285,1 kB	992,0 kB	[dosya listesi]
riscv64	0.37.3+ds-9+b1	285,6 kB	725,0 kB	[dosya listesi]
s390x	0.37.3+ds-9	249,8 kB	876,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	0.37.3+ds-9	334,6 kB	864,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	0.37.3+ds-9	230,4 kB	1.062,0 kB	[dosya listesi]
x32 (resmi olmayan port)	0.37.3+ds-9	286,2 kB	815,0 kB	[dosya listesi]