Paket: libseqlib2 (1.2.0+dfsg-11 ve diğerleri) [debports]
libseqlib2 için bağlantılar
Debian Kaynakları:
Kaynak Paketini İndir:
BulunamadıGeliştiriciler:
Dış Kaynaklar:
- Ana Sayfa [github.com]
Benzer paketler:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
libseqlib2 ile İlgili Diğer Paketler
|
|
|
|
-
- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
-
- dep: libfml0 (>= 0.1+git20190320.b499514)
- library for assembling Illumina short reads in small regions
-
- dep: libgcc-s2 (>= 4.2.1)
- GCC support library
-
- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
-
- dep: libjsoncpp26 (>= 1.9.6)
- library for reading and writing JSON for C++
-
- dep: libssw0 (>= 1.1)
- fast SIMD parallelized implementation of the Smith-Waterman algorithm
-
- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
-
- dep: zlib1g (>= 1:1.2.3.3)
- compression library - runtime
libseqlib2 indir
| Mimari | Sürüm | Paket Boyutu | Kurulu Boyut | Dosyalar |
|---|---|---|---|---|
| m68k (resmi olmayan port) | 1.2.0+dfsg-11+b2 | 150,6 kB | 467,0 kB | [dosya listesi] |