Paket: vdjtools (1.2.1+git20190311+repack-2) [non-free]

vdjtools için bağlantılar

Debian Kaynakları:

vdjtools Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

framework for post-analysis of B/T cell repertoires

VDJtools is an open-source Java/Groovy-based framework designed to facilitate analysis of immune repertoire sequencing (RepSeq) data. VDJtools computes a wide set of statistics and is able to perform various forms of cross-sample analysis. Both comprehensive tabular output and publication-ready plots are provided.

The main aims of the VDJtools Project are:

 * To ensure consistency between post-analysis methods and results
 * To save the time of bioinformaticians analyzing RepSeq data
 * To create an API framework facilitating development of new RepSeq
   analysis applications
 * To provide a simple enough command line tool so it could be used by
   immunologists and biologists with little computational background

vdjtools ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: default-jre

Standard Java or Java compatible Runtime
dep: libvdjtools-java

Java library of vdjtools

rec: r-cran-ape

GNU R package for Analyses of Phylogenetics and Evolution
rec: r-cran-circlize

Circular Visualization
rec: r-cran-ffield

Force field simulation for a set of points
rec: r-cran-ggplot2

implementation of the Grammar of Graphics
rec: r-cran-gplots

GNU R package with tools for plotting data by Greg Warnes et al
rec: r-cran-gridbase

GNU R Integration of base and grid graphics
rec: r-cran-gridextra

GNU R package with extensions for the grid package
rec: r-cran-mass

GNU R package of Venables and Ripley's MASS
rec: r-cran-plotrix

GNU R package providing various plotting functions
rec: r-cran-rcolorbrewer

GNU R package providing suitable color palettes
rec: r-cran-reshape

Flexibly reshape data
rec: r-cran-reshape2

Flexibly reshape data: a reboot of the reshape package
rec: r-cran-scales

Scale functions for visualization
rec: r-cran-venndiagram

Generate High-Resolution Venn and Euler Plots

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Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
all	42,2 kB	53,0 kB	[dosya listesi]