[ Kaynak: ariba ]
Paket: ariba (2.14.7+ds-2 ve diğerleri)
ariba için bağlantılar
Debian Kaynakları:
- Hata Raporları
- Developer Information
- Debian Değişim Günlüğü
- Telif Hakkı Dosyası
- Debian Yama Takipçisi
ariba Kaynak Paketini İndir:
Geliştiriciler:
- Debian Med Packaging Team (QA Sayfası, Posta Arşivi)
- Sascha Steinbiss (QA Sayfası)
- Étienne Mollier (QA Sayfası)
Dış Kaynaklar:
- Ana Sayfa [github.com]
Benzer paketler:
Antibiotic Resistance Identification By Assembly
ARIBA is a tool that identifies antibiotic resistance genes by running local assemblies. The input is a FASTA file of reference genes and paired sequencing reads. ARIBA reports which of the reference genes were found, plus detailed information on the quality of the assemblies and any variants between the sequencing reads and the reference genes.
ariba ile İlgili Diğer Paketler
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-
- dep: bowtie2 [m68k değil]
- ultrafast memory-efficient short read aligner
- dep: bowtie2 (>= 2.1.0) [m68k]
-
- dep: cd-hit
- suite of programs designed to quickly group sequences
-
- dep: fastaq [m68k değil]
- FASTA and FASTQ file manipulation tools
- dep: fastaq (>= 3.12.0) [m68k]
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.27) [riscv64]
- dep: libc6 (>= 2.4) [m68k, mips64el]
-
- dep: libc6.1 (>= 2.1.3) [alpha]
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb
-
- dep: libfml0 (>= 0.1) [m68k değil]
- library for assembling Illumina short reads in small regions
- dep: libfml0 (>= 0.1-4~) [m68k]
-
- dep: libgcc-s1 (>= 3.0) [m68k değil]
- GCC support library
-
- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC support library
-
- dep: libminimap0 (>= 0.2)
- library for approximate mapping of long biosequences
-
- dep: libstdc++6 (>= 13.1) [m68k değil]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 5.2) [m68k]
-
- dep: mash
- fast genome and metagenome distance estimation using MinHash
-
- dep: mummer
- Efficient sequence alignment of full genomes
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.11) [m68k]
- dep: python3 (<< 3.13) [m68k değil]
- dep: python3 (>= 3.11~) [m68k değil]
- dep: python3 (>= 3.9~) [m68k]
-
- dep: python3-biopython
- Python3 library for bioinformatics
-
- dep: python3-bs4 [m68k]
- error-tolerant HTML parser for Python 3
- dep: python3-bs4 (>= 4.1.0) [m68k değil]
-
- dep: python3-dendropy
- DendroPy Phylogenetic Computing Library (Python 3)
-
- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
-
- dep: python3-pymummer [m68k değil]
- Python 3 interface to MUMmer
- dep: python3-pymummer (>= 0.10.2) [m68k]
-
- dep: python3-pysam [m68k değil]
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
- dep: python3-pysam (>= 0.9.1) [m68k]
-
- dep: python3-tk
- Tkinter - Writing Tk applications with Python 3.x
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
-
- sug: spades
- genome assembler for single-cell and isolates data sets
ariba indir
Mimari | Sürüm | Paket Boyutu | Kurulu Boyut | Dosyalar |
---|---|---|---|---|
alpha (resmi olmayan port) | 2.14.7+ds-2 | 1.907,8 kB | 20.732,0 kB | [dosya listesi] |
amd64 | 2.14.7+ds-2 | 1.909,6 kB | 20.588,0 kB | [dosya listesi] |
arm64 | 2.14.7+ds-2 | 1.905,1 kB | 20.732,0 kB | [dosya listesi] |
m68k (resmi olmayan port) | 2.14.6+ds-2+b1 | 1.910,0 kB | 20.567,0 kB | [dosya listesi] |
mips64el | 2.14.7+ds-2 | 1.906,8 kB | 20.740,0 kB | [dosya listesi] |
ppc64el | 2.14.7+ds-2 | 1.909,2 kB | 20.732,0 kB | [dosya listesi] |
riscv64 | 2.14.7+ds-2 | 1.909,0 kB | 20.532,0 kB | [dosya listesi] |