Paket: murasaki-mpi (1.68.6-12)

murasaki-mpi için bağlantılar

Debian Kaynakları:

murasaki Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [murasaki.dna.bio.keio.ac.jp]

Benzer paketler:

homology detection tool across multiple large genomes (MPI-version)

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

This package provides the MPI-enabled binary for murasaki. While this will speed up operation on multi-processor machines it will slow down on a single processor.

murasaki-mpi ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libboost-filesystem1.74.0 (>= 1.74.0)

filesystem operations (portable paths, iteration over directories, etc) in C++
dep: libboost-iostreams1.74.0 (>= 1.74.0)

Boost.Iostreams Library
dep: libboost-regex1.74.0-icu67

sanal paketi sağlayan libboost-regex1.74.0
dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libopenmpi3 (>= 4.1.0)

high performance message passing library -- shared library
dep: libstdc++6 (>= 5.2)

GNU Standard C++ Library v3
dep: murasaki-common

homology detection tool across multiple large genomes (common files)

murasaki-mpi indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
ppc64el	627,7 kB	5.202,0 kB	[dosya listesi]