Paket: mindthegap (2.2.2-2)

mindthegap için bağlantılar

Debian Kaynakları:

mindthegap Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

performs detection and assembly of DNA insertion variants in NGS read datasets

Designed to call insertions of any size, whether they are novel or duplicated, homozygous or heterozygous in the donor genome. It takes as input a set of reads and a reference genome. It outputs two sets of FASTA sequences: one is the set of breakpoints of detection insertion sites, the other is the set of assembled insertions for each breakpoint. MindTheGap can also be used as a genome assembly finishing tool. It can fill the gaps between a set of input contigs without any a priori on their relative order and orientation. It outputs the results in gfa file.

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bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.17)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libgatbcore3 (>= 1.4.2+dfsg)

dynamic library of the Genome Analysis Toolbox
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libhdf5-103-1

HDF5 C runtime files - serial version
dep: libstdc++6 (>= 9)

GNU Standard C++ Library v3

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Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
ppc64el	225,7 kB	1.112,0 kB	[dosya listesi]