Paket: python3-freecontact (1.1-6 ve diğerleri)

python3-freecontact için bağlantılar

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python-freecontact Kaynak Paketini İndir:

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Dış Kaynaklar:

Ana Sayfa [rostlab.org]

Benzer paketler:

fast protein contact predictor - binding for Python3

FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011).

FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible.

A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input.

jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example.

This package contains the Python3 binding.

python3-freecontact ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libboost-python1.74.0 (>= 1.74.0+ds1)

Boost.Python Library
dep: libboost-python1.74.0-py311

sanal paketi sağlayan libboost-python1.74.0
dep: libc6 (>= 2.32)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libfreecontact0v5 (>= 1.0.21)

fast protein contact predictor library
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3
dep: python3 (<< 3.12)

interactive high-level object-oriented language (default python3 version)

dep: python3 (>= 3.11~)

python3-freecontact indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
ppc64el	1.1-6+b4	72,4 kB	272,0 kB	[dosya listesi]