Paket: belvu (4.44.1+dfsg-7.1 och andra)

Länkar för belvu

Debianresurser:

Hämta källkodspaketet seqtools:

Ansvariga:

Externa resurser:

Hemsida [www.sanger.ac.uk]

Liknande paket:

multiple sequence alignment viewer and phylogenetic tool

Belvu is a multiple sequence alignment viewer and phylogenetic tool with an extensive set of user-configurable modes to color residues.

 * View multiple sequence alignments.
 * Residues can be coloured by conservation, with user-configurable
   cutoffs and colours.
 * Residues can be coloured by residue type (user-configurable).
 * Colour schemes can be imported or exported.
 * Swissprot (or PIR) entries can be fetched by double clicking.
 * The position in the alignment can be easily tracked.
 * Manual deletion of rows and columns.
 * Automatic editing of rows and columns based on customisable criteria:
    - removal of all-gap columns;
    - removal of all gaps;
    - removal of redundant sequences;
    - removal of a column by a user-specified percentage of gaps;
    - filtering of sequences by percent identity;
    - removal of sequences by a user-specified percentage of gaps;
    - removal of partial sequences (those starting or ending with
      gaps); and
    - removal of columns by conservation (with user-specified
      upper/lower cutoffs).
 * The alignment can be saved in Stockholm, Selex, MSF or FASTA format.
 * Distance matrices between sequences can be generated using a variety
   of distance metrics.
 * Distance matrices can be imported or exported.
 * Phylogenetic trees can be constructed based on various distance-based
   tree reconstruction algorithms.
 * Trees can be saved in New Hampshire format.
 * Belvu can perform bootstrap phylogenetic reconstruction.

Märken: Interface Toolkit: GTK

Andra paket besläktade med belvu

beror

rekommenderar

föreslår

enhances

dep: libatk1.0-0t64 (>= 1.12.4) [sparc64]

ATK accessibility toolkit
dep: libc6 (>= 2.34) [ej alpha, ia64, sh4]

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb

dep: libc6 (>= 2.37) [sh4]
dep: libc6.1 (>= 2.34) [alpha]

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: libcairo2 (>= 1.2.4)

Cairo 2D vector graphics library
dep: libcurl4 (>= 7.16.2) [alpha, ia64, ppc64, sparc64, x32]

easy-to-use client-side URL transfer library (OpenSSL flavour)
dep: libcurl4t64 (>= 7.16.2) [ej alpha, ia64, ppc64, sparc64, x32]

easy-to-use client-side URL transfer library (OpenSSL flavour)
dep: libfontconfig1 (>= 2.12.6) [sparc64]

generic font configuration library - runtime
dep: libfreetype6 (>= 2.2.1) [sparc64]

FreeType 2 font engine, shared library files
dep: libgbtools0t64 (>= 4.44.1+dfsg)

library for visualising sequence alignments
dep: libgcc-s1 (>= 3.0) [sparc64]

GCC stödbibliotek

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [ia64]
dep: libgdk-pixbuf-2.0-0 (>= 2.22.0) [sparc64]

GDK Pixbuf library
dep: libglib2.0-0t64 (>= 2.22.0)

GLib library of C routines
dep: libgtk2.0-0 (>= 2.12.0) [alpha, sparc64]

GTK graphical user interface library - old version
dep: libgtk2.0-0t64 (>= 2.12.0) [ej alpha, sparc64]

GTK graphical user interface library - old version
dep: libharfbuzz0b (>= 0.6.0) [sparc64]

OpenType text shaping engine (shared library)
dep: libjsoncpp25 (>= 1.9.5) [sparc64]

library for reading and writing JSON for C++
dep: libpango-1.0-0 (>= 1.14.0)

Layout and rendering of internationalized text
dep: libpangocairo-1.0-0 (>= 1.14.0) [sparc64]

Layout and rendering of internationalized text
dep: libpangoft2-1.0-0 (>= 1.14.0) [sparc64]

Layout and rendering of internationalized text
dep: libstdc++6 (>= 4.1.1)

GNU standardbibliotek v3 för C++

Hämta belvu

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	4.44.1+dfsg-7.1	1.028,7 kbyte	1.277,0 kbyte	[filförteckning]
amd64	4.44.1+dfsg-7.1+b1	1.030,2 kbyte	1.231,0 kbyte	[filförteckning]
arm64	4.44.1+dfsg-7.1+b1	1.019,6 kbyte	1.275,0 kbyte	[filförteckning]
armel	4.44.1+dfsg-7.1+b1	1.013,9 kbyte	1.190,0 kbyte	[filförteckning]
armhf	4.44.1+dfsg-7.1+b1	1.014,1 kbyte	1.138,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	4.44.1+dfsg-7.1	1.026,4 kbyte	1.221,0 kbyte	[filförteckning]
i386	4.44.1+dfsg-7.1+b1	1.038,7 kbyte	1.262,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.051,1 kbyte	1.457,0 kbyte	[filförteckning]
m68k (inofficiell anpassning)	4.44.1+dfsg-7.1	1.028,3 kbyte	1.241,0 kbyte	[filförteckning]
mips64el	4.44.1+dfsg-7.1+b1	1.032,6 kbyte	1.360,0 kbyte	[filförteckning]
ppc64 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.037,5 kbyte	1.338,0 kbyte	[filförteckning]
ppc64el	4.44.1+dfsg-7.1+b1	1.037,4 kbyte	1.339,0 kbyte	[filförteckning]
riscv64	4.44.1+dfsg-7.1+b1	1.027,4 kbyte	1.191,0 kbyte	[filförteckning]
s390x	4.44.1+dfsg-7.1+b1	1.025,0 kbyte	1.247,0 kbyte	[filförteckning]
sh4 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.042,5 kbyte	1.274,0 kbyte	[filförteckning]
sparc64 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.014,9 kbyte	1.990,0 kbyte	[filförteckning]
x32 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.029,8 kbyte	1.213,0 kbyte	[filförteckning]