Paket: bio-vcf (0.9.5-3)

Länkar för bio-vcf

Debianresurser:

Hämta källkodspaketet bio-vcf:

Ansvariga:

Debian Med Packaging Team (QA-sida, E-postarkiv)
Andreas Tille (QA-sida)
Nilesh Patra (QA-sida)

Externa resurser:

Hemsida [github.com]

Liknande paket:

domain specific language (DSL) for processing the VCF format

Bio-vcf provides a domain specific language (DSL) for processing the VCF format. Record named fields can be queried with regular expressions, e.g.

 sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4

Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not only very fast for genome-wide (WGS) data, it also comes with a really nice filtering, evaluation and rewrite language and it can output any type of textual data, including VCF header and contents in RDF and JSON.

Andra paket besläktade med bio-vcf

beror

rekommenderar

föreslår

enhances

dep: ruby

Interpreter of object-oriented scripting language Ruby (default version)

Hämta bio-vcf

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
all	28,1 kbyte	141,0 kbyte	[filförteckning]