Paket: miniasm (0.3+dfsg-2)
Länkar för miniasm
Debianresurser:
Hämta källkodspaketet miniasm:
Ansvariga:
Externa resurser:
- Hemsida [github.com]
Liknande paket:
ultrafast de novo assembler for long noisy DNA sequencing reads
Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.
Andra paket besläktade med miniasm
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- dep: libc6 (>= 2.14) [amd64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.4) [ej amd64, arm64, ppc64el]
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- dep: zlib1g (>= 1:1.1.4)
- Kompressionsbibliotek - körtidspaket
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- rec: minimap
- tool for approximate mapping of long biosequences such as DNA reads
Hämta miniasm
Arkitektur | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|
amd64 | 29,6 kbyte | 70,0 kbyte | [filförteckning] |
arm64 | 27,8 kbyte | 66,0 kbyte | [filförteckning] |
armel | 28,3 kbyte | 66,0 kbyte | [filförteckning] |
armhf | 26,8 kbyte | 54,0 kbyte | [filförteckning] |
i386 | 31,9 kbyte | 74,0 kbyte | [filförteckning] |
mips64el | 30,4 kbyte | 78,0 kbyte | [filförteckning] |
mipsel | 30,0 kbyte | 77,0 kbyte | [filförteckning] |
ppc64el | 32,6 kbyte | 83,0 kbyte | [filförteckning] |
s390x | 28,5 kbyte | 74,0 kbyte | [filförteckning] |