Paket: macsyfinder (2.0~rc1-3 och andra)

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Hemsida [github.com]

Liknande paket:

detection of macromolecular systems in protein datasets

MacSyFinder is a program to model and detect macromolecular systems, genetic pathways... in protein datasets. In prokaryotes, these systems have often evolutionarily conserved properties: they are made of conserved components, and are encoded in compact loci (conserved genetic architecture). The user models these systems with MacSyFinder to reflect these conserved features, and to allow their efficient detection

This package presents the Open Source Java API to biological databases and a series of mostly sequence-based algorithms.

Andra paket besläktade med macsyfinder

beror

rekommenderar

föreslår

enhances

dep: hmmer

profile hidden Markov models for protein sequence analysis
dep: libjs-jquery

JavaScript library for dynamic web applications
dep: libjs-sphinxdoc (>= 2.4.3-5~)

JavaScript support for Sphinx documentation
dep: libjs-underscore

JavaScript's functional programming helper library
dep: ncbi-blast+

next generation suite of BLAST sequence search tools
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-colorlog

formatter to use with the logging module of Python 3
dep: python3-networkx

tool to create, manipulate and study complex networks (Python3)
dep: python3-packaging

core utilities for python3 packages
dep: python3-yaml

YAML parser and emitter for Python3
dep: sphinx-rtd-theme-common (>= 0.5.1+dfsg)

sphinx theme from readthedocs.org (common files)

Hämta macsyfinder

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
amd64	2.0~rc1-3+b1	11.320,2 kbyte	33.920,0 kbyte	[filförteckning]
i386	2.0~rc1-3+b1	11.319,0 kbyte	33.920,0 kbyte	[filförteckning]