Balík: sra-toolkit (3.0.9+dfsg-7 a iné)

Odkazy pre sra-toolkit

Zdroje Debian:

Stiahnuť zdrojový balík sra-sdk:

Správcovia:

Externé zdroje:

Domovská stránka [github.com]

Podobné balíky:

utilities for the NCBI Sequence Read Archive

Tools for reading the SRA archive, generally by converting individual runs into some commonly used format such as fastq.

The textual dumpers "sra-dump" and "vdb-dump" are provided in this release as an aid in visual inspection. It is likely that their actual output formatting will be changed in the near future to a stricter, more formalized representation[s]. PLEASE DO NOT RELY UPON THE OUTPUT FORMAT SEEN IN THIS RELEASE.

Other tools distributed in this package are:

 abi-dump, abi-load
 align-info
 bam-load
 cache-mgr
 cg-load
 copycat
 fasterq-dump
 fastq-dump, fastq-load
 helicos-load
 illumina-dump, illumina-load
 kar
 kdbmeta
 latf-load
 pacbio-load
 prefetch
 rcexplain
 remote-fuser
 sff-dump, sff-load
 sra-pileup, sra-sort, sra-stat, srapath
 srf-load
 test-sra
 vdb-config, vdb-copy, vdb-decrypt, vdb-encrypt, vdb-get, vdb-lock,
 vdb-passwd, vdb-unlock, vdb-validate

The "help" information will be improved in near future releases, and the tool options will become standardized across the set. More documentation will also be provided documentation on the NCBI web site.

Tool options may change in the next release. Version 1 tool options will remain supported wherever possible in order to preserve operation of any existing scripts.

Ostatné balíky súvisiace s balíkom sra-toolkit

závisí

odporúča

navrhuje

vylepšuje

dep: libc6 (>= 2.38)

knižnica GNU C - zdieľané knižnice
tiež virtuálny balík poskytovaný balíkom libc6-udeb
dep: libgcc-s1 (>= 3.0) [amd64]

podporná knižnica GCC

dep: libgcc-s1 (>= 4.5) [arm64]
dep: libhdf5-310 (>= 1.14.3)

HDF5 C runtime files - serial version
dep: libmagic1t64 (>= 5.12)

určenie typu dát v súbore pomocou „magických čísel” - knižnica
dep: libncbi-vdb3 (>= 3.0.9+dfsg)

libraries for using data in the INSDC Sequence Read Archives
dep: libncbi-wvdb3 (>= 3.0.9+dfsg)

virtual layer update module of ncbi-vdb library
dep: libstdc++6 (>= 14)

štandardná knižnica C++ GNU v3
dep: libxml2 (>= 2.7.4)

knižnica GNOME XML
dep: zlib1g (>= 1:1.2.2)

komprimačná knižnica - dynamická verzia

rec: med-config

Debian Med general config package

Stiahnuť sra-toolkit

Stiahnuť pre všetky dostupné architektúry
Architektúra	Verzia	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	3.0.9+dfsg-7+b2	6,366.4 kB	16,603.0 kB	[zoznam súborov]
arm64	3.0.9+dfsg-7+b2	6,198.0 kB	18,304.0 kB	[zoznam súborov]