[ Zdroj: optimir ]
Balík: optimir (1.2-2)
Odkazy pre optimir
Zdroje Debian:
Stiahnuť zdrojový balík optimir:
Správcovia:
Externé zdroje:
- Domovská stránka [github.com]
Podobné balíky:
Integrating genetic variations in miRNA alignment
OptimiR is a miRSeq data alignment workflow. It integrates genetic information to assess the impact of variants on miRNA expression.
OptimiR: A bioinformatics pipeline designed to detect and quantify miRNAs, isomiRs and polymiRs from miRSeq data, & study the impact of genetic variations on polymiRs' expression.
Ostatné balíky súvisiace s balíkom optimir
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
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- dep: cutadapt
- Clean biological sequences from high-throughput sequencing reads
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: r-cran-ggplot2
- implementácia Gramatiky grafiky
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- rec: r-cran-gridextra
- GNU R - balík s rozšíreniami balíka grid
Stiahnuť optimir
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| all | 1,002.4 kB | 7,403.0 kB | [zoznam súborov] |