Package: trinityrnaseq (2.15.2+dfsg-1 and others)

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RNA-Seq De novo Assembly

Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-seq reads. Trinity partitions the sequence data into many individual de Bruijn graphs, each representing the transcriptional complexity at a given gene or locus, and then processes each graph independently to extract full-length splicing isoforms and to tease apart transcripts derived from paralogous genes.

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Download trinityrnaseq

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.15.1+dfsg-2	1,656.3 kB	8,135.0 kB	[list of files]
amd64	2.15.2+dfsg-1	1,696.9 kB	7,531.0 kB	[list of files]
arm64	2.15.2+dfsg-1	1,622.4 kB	7,755.0 kB	[list of files]
ia64 (unofficial port)	2.15.1+dfsg-2	1,717.4 kB	9,611.0 kB	[list of files]
m68k (unofficial port)	2.15.1+dfsg-2	1,654.5 kB	7,399.0 kB	[list of files]
ppc64 (unofficial port)	2.15.1+dfsg-2	1,664.4 kB	8,572.0 kB	[list of files]
ppc64el	2.15.2+dfsg-1	1,672.4 kB	8,267.0 kB	[list of files]
riscv64	2.15.2+dfsg-1	1,663.5 kB	6,803.0 kB	[list of files]
sh4 (unofficial port)	2.15.1+dfsg-2	1,726.5 kB	7,736.0 kB	[list of files]
sparc64 (unofficial port)	2.15.1+dfsg-2	1,576.3 kB	18,081.0 kB	[list of files]
x32 (unofficial port)	2.15.1+dfsg-2	1,676.7 kB	7,287.0 kB	[list of files]