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/usr/bin/khmer
/usr/lib/khmer/bin/abundance-dist-single.py
/usr/lib/khmer/bin/abundance-dist.py
/usr/lib/khmer/bin/annotate-partitions.py
/usr/lib/khmer/bin/count-median.py
/usr/lib/khmer/bin/do-partition.py
/usr/lib/khmer/bin/extract-long-sequences.py
/usr/lib/khmer/bin/extract-paired-reads.py
/usr/lib/khmer/bin/extract-partitions.py
/usr/lib/khmer/bin/fastq-to-fasta.py
/usr/lib/khmer/bin/filter-abund-single.py
/usr/lib/khmer/bin/filter-abund.py
/usr/lib/khmer/bin/filter-stoptags.py
/usr/lib/khmer/bin/find-knots.py
/usr/lib/khmer/bin/interleave-reads.py
/usr/lib/khmer/bin/load-graph.py
/usr/lib/khmer/bin/load-into-counting.py
/usr/lib/khmer/bin/make-initial-stoptags.py
/usr/lib/khmer/bin/merge-partitions.py
/usr/lib/khmer/bin/normalize-by-median.py
/usr/lib/khmer/bin/partition-graph.py
/usr/lib/khmer/bin/readstats.py
/usr/lib/khmer/bin/sample-reads-randomly.py
/usr/lib/khmer/bin/split-paired-reads.py
/usr/lib/khmer/bin/trim-low-abund.py
/usr/lib/khmer/bin/unique-kmers.py
/usr/lib/python3/dist-packages/khmer-2.1.2.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/khmer-2.1.2.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/khmer-2.1.2.egg-info/not-zip-safe
/usr/lib/python3/dist-packages/khmer-2.1.2.egg-info/requires.txt
/usr/lib/python3/dist-packages/khmer-2.1.2.egg-info/top_level.txt
/usr/lib/python3/dist-packages/khmer/__init__.py
/usr/lib/python3/dist-packages/khmer/_khmer.cpython-37m-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/khmer/_oxli/__init__.py
/usr/lib/python3/dist-packages/khmer/_oxli/assembly.cpp
/usr/lib/python3/dist-packages/khmer/_oxli/assembly.cpython-37m-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/khmer/_oxli/assembly.pxd
/usr/lib/python3/dist-packages/khmer/_oxli/assembly.pyx
/usr/lib/python3/dist-packages/khmer/_oxli/graphs.cpp
/usr/lib/python3/dist-packages/khmer/_oxli/graphs.cpython-37m-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/khmer/_oxli/graphs.pxd
/usr/lib/python3/dist-packages/khmer/_oxli/graphs.pyx
/usr/lib/python3/dist-packages/khmer/_oxli/hashing.cpp
/usr/lib/python3/dist-packages/khmer/_oxli/hashing.cpython-37m-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/khmer/_oxli/hashing.pxd
/usr/lib/python3/dist-packages/khmer/_oxli/hashing.pyx
/usr/lib/python3/dist-packages/khmer/_oxli/hllcounter.pxd
/usr/lib/python3/dist-packages/khmer/_oxli/oxli_types.pxd
/usr/lib/python3/dist-packages/khmer/_oxli/parsing.cpp
/usr/lib/python3/dist-packages/khmer/_oxli/parsing.cpython-37m-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/khmer/_oxli/parsing.pxd
/usr/lib/python3/dist-packages/khmer/_oxli/parsing.pyx
/usr/lib/python3/dist-packages/khmer/_oxli/traversal.pxd
/usr/lib/python3/dist-packages/khmer/_oxli/utils.cpp
/usr/lib/python3/dist-packages/khmer/_oxli/utils.cpython-37m-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/khmer/_oxli/utils.pxd
/usr/lib/python3/dist-packages/khmer/_oxli/utils.pyx
/usr/lib/python3/dist-packages/khmer/_version.py
/usr/lib/python3/dist-packages/khmer/kfile.py
/usr/lib/python3/dist-packages/khmer/khmer_args.py
/usr/lib/python3/dist-packages/khmer/khmer_logger.py
/usr/lib/python3/dist-packages/khmer/tests/__init__.py
/usr/lib/python3/dist-packages/khmer/tests/graph_features.py
/usr/lib/python3/dist-packages/khmer/tests/khmer_tst_utils.py
/usr/lib/python3/dist-packages/khmer/tests/test-data/100-reads.fq.bz2
/usr/lib/python3/dist-packages/khmer/tests/test-data/100-reads.fq.gz
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/usr/lib/python3/dist-packages/khmer/tests/test-data/all-A.fa
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/usr/lib/python3/dist-packages/khmer/tests/test-data/badversion-k12.ht
/usr/lib/python3/dist-packages/khmer/tests/test-data/badversion-k32.stoptags
/usr/lib/python3/dist-packages/khmer/tests/test-data/badversion-k32.tagset
/usr/lib/python3/dist-packages/khmer/tests/test-data/banding-reads.fq
/usr/lib/python3/dist-packages/khmer/tests/test-data/biglump-random-20-a.fa
/usr/lib/python3/dist-packages/khmer/tests/test-data/bogus.fa
/usr/lib/python3/dist-packages/khmer/tests/test-data/casava_18-pe.fq
/usr/lib/python3/dist-packages/khmer/tests/test-data/combine_parts_1.fa
/usr/lib/python3/dist-packages/khmer/tests/test-data/dn-test-all-paired-all-keep.fa
/usr/lib/python3/dist-packages/khmer/tests/test-data/dn-test-none-paired.fa
/usr/lib/python3/dist-packages/khmer/tests/test-data/dn-test-some-paired-all-keep.fa
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/usr/lib/python3/dist-packages/khmer/tests/test-data/fakelump.fa.stoptags.txt
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/usr/lib/python3/dist-packages/khmer/tests/test-data/goodversion-k12.ht
/usr/lib/python3/dist-packages/khmer/tests/test-data/goodversion-k12.ht.gz
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/usr/lib/python3/dist-packages/khmer/tests/test-data/multi-output.fa
/usr/lib/python3/dist-packages/khmer/tests/test-data/normC20k20.ct
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/usr/lib/python3/dist-packages/khmer/tests/test-data/paired-broken2.fq.1
/usr/lib/python3/dist-packages/khmer/tests/test-data/paired-broken2.fq.2
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/usr/lib/python3/dist-packages/khmer/tests/test-data/paired-broken4.fq.2
/usr/lib/python3/dist-packages/khmer/tests/test-data/paired-mixed-2.fq
/usr/lib/python3/dist-packages/khmer/tests/test-data/paired-mixed-broken.fq
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/usr/lib/python3/dist-packages/khmer/tests/test-data/real-partition-small.fa
/usr/lib/python3/dist-packages/khmer/tests/test-data/real-partition-tiny.fa
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/usr/lib/python3/dist-packages/khmer/tests/test-data/single-read.fa
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/usr/lib/python3/dist-packages/khmer/tests/test_sequence_validation.py
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/usr/lib/python3/dist-packages/khmer/tests/test_threaded_sequence_processor.py
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/usr/lib/python3/dist-packages/khmer/trimming.py
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/usr/lib/python3/dist-packages/oxli/__init__.py
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/usr/lib/python3/dist-packages/oxli/functions.py
/usr/lib/python3/dist-packages/oxli/partition.py
/usr/share/doc/khmer/changelog.Debian.gz
/usr/share/doc/khmer/changelog.gz
/usr/share/doc/khmer/copyright
/usr/share/lintian/overrides/khmer
/usr/share/man/man1/khmer.1.gz
/usr/share/metainfo/khmer.metainfo.xml
/usr/share/python3/runtime.d/khmer.rtupdate