[ Bron: r-bioc-progeny ]
Pakket: r-bioc-progeny (1.24.0+ds-1)
Verwijzigingen voor r-bioc-progeny
Debian bronnen:
Het bronpakket r-bioc-progeny downloaden:
- [r-bioc-progeny_1.24.0+ds-1.dsc]
- [r-bioc-progeny_1.24.0+ds.orig.tar.xz]
- [r-bioc-progeny_1.24.0+ds-1.debian.tar.xz]
Beheerders:
Externe bronnen:
- Homepage [bioconductor.org]
Vergelijkbare pakketten:
activity inference from gene expression
This package provides a function to infer pathway activity from gene expression using PROGENy. It contains the linear model which is described in the publication "Perturbation-response genes reveal signaling footprints in cancer gene expression".
Andere aan r-bioc-progeny gerelateerde pakketten
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- dep: r-api-4.0
- virtueel pakket geboden door r-base-core
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- dep: r-api-bioc-3.18
- virtueel pakket geboden door r-bioc-biocgenerics
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- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-decoupler
- infer biological activities from omics data
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- dep: r-cran-dplyr
- GNU R grammar of data manipulation
-
- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- dep: r-cran-ggrepel
- auto-position non-overlapping text labels in plots
-
- dep: r-cran-gridextra
- GNU R package with extensions for the grid package
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- dep: r-cran-reshape2
- Flexibly reshape data: a reboot of the reshape package
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- dep: r-cran-tidyr
- GNU R package to easily tidy data
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- sug: r-bioc-biocfilecache
- GNU R management of files across sessions
-
- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
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- sug: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
-
- sug: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
-
- sug: r-bioc-singlecellexperiment
- S4 Classes for Single Cell Data
-
- sug: r-cran-broom
- convert statistical analysis objects into tidy data frames with GNU R
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-pheatmap
- GNU R package to create pretty heatmaps
-
- sug: r-cran-readr
- GNU R package to read rectangular text data
-
- sug: r-cran-readxl
- GNU R package to read Excel files
-
- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
-
- sug: r-cran-seurat
- Tools for Single Cell Genomics
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- sug: r-cran-testthat (>= 2.1.0)
- GNU R testsuite
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- sug: r-cran-tibble
- GNU R Simple Data Frames