Pakket: r-bioc-deseq2 (1.42.1+dfsg-1)

Verwijzigingen voor r-bioc-deseq2

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Het bronpakket r-bioc-deseq2 downloaden:

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Externe bronnen:

Homepage [bioconductor.org]

Vergelijkbare pakketten:

R package for RNA-Seq Differential Expression Analysis

Differential gene expression analysis based on the negative binomial distribution. Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.

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dep: libblas3

Basic Linear Algebra Reference implementations, shared library

of libblas.so.3

virtueel pakket geboden door libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libc6 (>= 2.29)

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
dep: libgcc-s1 (>= 3.0) [niet armel, armhf]

GCC support bibliotheek

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: liblapack3

Library of linear algebra routines 3 - shared version

of liblapack.so.3

virtueel pakket geboden door liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3
dep: r-api-4.0

virtueel pakket geboden door r-base-core
dep: r-api-bioc-3.18

virtueel pakket geboden door r-bioc-biocgenerics
dep: r-bioc-biobase

base functions for Bioconductor
dep: r-bioc-biocgenerics (>= 0.7.5)

generic functions for Bioconductor
dep: r-bioc-biocparallel

BioConductor facilities for parallel evaluation
dep: r-bioc-genomicranges

BioConductor representation and manipulation of genomic intervals
dep: r-bioc-iranges

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-matrixgenerics

S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects
dep: r-bioc-s4vectors (>= 0.23.18)

BioConductor S4 implementation of vectors and lists
dep: r-bioc-summarizedexperiment (>= 1.1.6)

BioConductor assay container
dep: r-cran-ggplot2 (>= 3.4.0)

implementation of the Grammar of Graphics
dep: r-cran-locfit

GNU R local regression, likelihood and density estimation
dep: r-cran-matrixstats

GNU R methods that apply to rows and columns of a matrix
dep: r-cran-rcpp (>= 0.11.0)

GNU R package for Seamless R and C++ Integration
dep: r-cran-rcpparmadillo

GNU R package for Armadillo C++ linear algebra library

sug: r-bioc-glmgampoi

GNU R fit a Gamma-Poisson generalized linear model
sug: r-bioc-tximeta

Transcript Quantification Import with Automatic Metadata
sug: r-bioc-tximport

transcript-level estimates for biological sequencing
sug: r-bioc-tximportdata

GNU R various transcript abundance quantifiers
sug: r-cran-biocmanager

access the Bioconductor project package repository
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-pbapply

GNU R package providing progress bars for vectorized R functions
sug: r-cran-pheatmap

GNU R package to create pretty heatmaps
sug: r-cran-rcolorbrewer

GNU R package providing suitable color palettes
sug: r-cran-readr

GNU R package to read rectangular text data
sug: r-cran-rmarkdown

convert R markdown documents into a variety of formats
sug: r-cran-testthat

GNU R testsuite

r-bioc-deseq2 downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	1.237,3 kB	1.716,0 kB	[overzicht]
arm64	1.224,5 kB	1.740,0 kB	[overzicht]
armel	1.229,9 kB	1.706,0 kB	[overzicht]
armhf	1.227,8 kB	1.642,0 kB	[overzicht]
i386	1.246,1 kB	1.742,0 kB	[overzicht]
mips64el	1.226,9 kB	1.748,0 kB	[overzicht]
ppc64el	1.237,7 kB	1.804,0 kB	[overzicht]
s390x	1.240,6 kB	1.731,0 kB	[overzicht]