[ Bron: seqan-raptor ]
Pakket: seqan-raptor (3.0.1+ds-5 en anderen)
Verwijzigingen voor seqan-raptor
Debian bronnen:
Het bronpakket seqan-raptor downloaden:
- [seqan-raptor_3.0.1+ds-5.dsc]
- [seqan-raptor_3.0.1+ds.orig.tar.xz]
- [seqan-raptor_3.0.1+ds-5.debian.tar.xz]
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
pre-filter for querying very large collections of nucleotide sequences
Raptor is a system for approximately searching many queries such as next-generation sequencing reads or transcripts in large collections of nucleotide sequences. Raptor uses winnowing minimizers to define a set of representative k-mers, an extension of the interleaved Bloom filters (IBFs) as a set membership data structure and probabilistic thresholding for minimizers. This approach allows compression and partitioning of the IBF to enable the effective use of secondary memory.
Andere aan seqan-raptor gerelateerde pakketten
|
|
|
|
-
- dep: libbz2-1.0
- high-quality block-sorting file compressor library - runtime
-
- dep: libc6 (>= 2.34)
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
-
- dep: libgcc-s1 (>= 3.4)
- GCC support bibliotheek
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
-
- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
-
- dep: libyaml-cpp0.8 (>= 0.7.0)
- YAML parser and emitter for C++
-
- dep: zlib1g (>= 1:1.1.4)
- compressiebibliotheek - programma's
-
- sug: cwl-runner
- virtueel pakket geboden door cwltool, toil