Pakket: pizzly (0.37.3+ds-5)

Verwijzigingen voor pizzly

Debian bronnen:

Het bronpakket pizzly downloaden:

Beheerders:

Externe bronnen:

Homepage [github.com]

Vergelijkbare pakketten:

Identifies gene fusions in RNA sequencing data

For the interpretation of the transcriptome (the abundance and sequence of RNA) of tomour cells one is particularly interested in transcripts that cannot be mapped to single genes but that are seen to be fused as parts from two genes. Likely eplanations are chromosomal translocations.

Pizzly can identify novel such peculiarities, building on interpretations on variable splicing by the tool kallisto. Both tools are elements of the bcbio workflow.

Andere aan pizzly gerelateerde pakketten

depends

recommends

suggests

enhances

dep: kallisto

near-optimal RNA-Seq quantification
dep: libc6 (>= 2.29) [niet armel]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb

dep: libc6 (>= 2.30) [armel]
dep: libgcc-s1 (>= 3.0) [niet armel, armhf, i386, mipsel]

GCC support bibliotheek

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [i386, mipsel]
dep: libstdc++6 (>= 10.2) [armel]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 7) [armhf]

dep: libstdc++6 (>= 9) [niet armel, armhf]
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: zlib1g (>= 1:1.1.4)

compressiebibliotheek - programma's

rec: python3-h5py

general-purpose Python interface to hdf5

pizzly downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	287,4 kB	876,0 kB	[overzicht]
arm64	251,7 kB	808,0 kB	[overzicht]
armel	240,5 kB	763,0 kB	[overzicht]
armhf	251,0 kB	591,0 kB	[overzicht]
i386	296,3 kB	883,0 kB	[overzicht]
mips64el	245,9 kB	962,0 kB	[overzicht]
mipsel	250,7 kB	940,0 kB	[overzicht]
ppc64el	282,7 kB	988,0 kB	[overzicht]
s390x	249,6 kB	876,0 kB	[overzicht]