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[ Bron: libedlib  ]

Pakket: python3-edlib (1.2.6-1)

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library for sequence alignment using edit distance (Python3 module)

A lightweight and super fast C/C++ library for sequence alignment using edit distance.

Calculating edit distance of two strings is as simple as: 

 edlibAlign("hello", 5, "world!", 6,
            edlibDefaultAlignConfig()).editDistance;
Features 

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

This package contains the Python3 module.

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Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 57,3 kB168,0 kB [overzicht]
arm64 51,9 kB164,0 kB [overzicht]
armel 49,5 kB147,0 kB [overzicht]
armhf 50,8 kB115,0 kB [overzicht]
i386 59,5 kB175,0 kB [overzicht]
mips64el 52,5 kB181,0 kB [overzicht]
mipsel 53,3 kB171,0 kB [overzicht]
ppc64el 61,3 kB228,0 kB [overzicht]
s390x 52,0 kB176,0 kB [overzicht]