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[ Source: velvet  ]

Package: velvet (1.2.10+dfsg1-9)

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Nucleic acid sequence assembler for very short reads

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Purpose: Analysing

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Download velvet

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 662.2 kB1,276.0 kB [list of files]
arm64 642.6 kB1,399.0 kB [list of files]
armel 659.7 kB1,364.0 kB [list of files]
armhf 643.7 kB1,052.0 kB [list of files]
i386 688.9 kB1,466.0 kB [list of files]
mips64el 658.0 kB1,511.0 kB [list of files]
ppc64el 669.4 kB1,590.0 kB [list of files]
riscv64 700.9 kB1,332.0 kB [list of files]
s390x 662.4 kB1,337.0 kB [list of files]