Package: vt (0.57721+ds-3 and others)

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Homepage [genome.sph.umich.edu]

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toolset for short variant discovery in genetic sequence data

vt is a variant tool set that discovers short variants from Next Generation Sequencing data.

Vt-normalize is a tool to normalize representation of genetic variants in the VCF. Variant normalization is formally defined as the consistent representation of genetic variants in an unambiguous and concise way. In vt a simple general algorithm to enforce this is implemented.

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Download vt

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.57721+ds-3+b1	694.3 kB	3,221.0 kB	[list of files]
amd64	0.57721+ds-3+b1	821.5 kB	2,902.0 kB	[list of files]
arm64	0.57721+ds-3+b2	702.6 kB	2,706.0 kB	[list of files]
armel	0.57721+ds-3+b1	637.2 kB	2,361.0 kB	[list of files]
armhf	0.57721+ds-3+b1	657.9 kB	1,661.0 kB	[list of files]
hppa (unofficial port)	0.57721+ds-3+b2	695.5 kB	2,646.0 kB	[list of files]
i386	0.57721+ds-3+b1	826.5 kB	3,065.0 kB	[list of files]
ia64 (unofficial port)	0.57721+ds-3+b1	906.8 kB	5,619.0 kB	[list of files]
m68k (unofficial port)	0.57721+ds-3+b2	735.5 kB	2,777.0 kB	[list of files]
mips64el	0.57721+ds-3+b1	604.5 kB	3,505.0 kB	[list of files]
ppc64 (unofficial port)	0.57721+ds-3+b1	702.2 kB	3,218.0 kB	[list of files]
ppc64el	0.57721+ds-3+b1	726.7 kB	3,090.0 kB	[list of files]
riscv64	0.57721+ds-3+b2	803.1 kB	2,342.0 kB	[list of files]
s390x	0.57721+ds-3+b1	757.8 kB	2,834.0 kB	[list of files]
sh4 (unofficial port)	0.57721+ds-3+b2	931.7 kB	2,642.0 kB	[list of files]
sparc64 (unofficial port)	0.57721+ds-3+b2	597.0 kB	3,097.0 kB	[list of files]
x32 (unofficial port)	0.57721+ds-3+b1	822.2 kB	2,813.0 kB	[list of files]