[ buster ]
[ Source: cyvcf2 ]
Package: python-cyvcf2 (0.10.4-1)
Links for python-cyvcf2
Debian Resources:
Download Source Package cyvcf2:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Steffen Moeller (QA Page)
- Liubov Chuprikova (QA Page)
External Resources:
- Homepage [github.com]
Similar packages:
VCF parser based on htslib (Python 2)
This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.
cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.
This package installs the library for Python 2.
Other Packages Related to python-cyvcf2
|
|
|
|
-
- dep: libbz2-1.0
- libreria compressione file a ordinamento blocchi di alta qualità - runtime
-
- dep: libc6 (>= 2.14) [amd64]
- Libreria C GNU: librerie condivise
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.17) [arm64]
- dep: libc6 (>= 2.7) [armhf, i386]
-
- dep: libcurl3-gnutls (>= 7.16.2)
- libreria lato client facile da usare per il trasferimento di URL (versione GnuTLS)
-
- dep: libhts2 (>= 1.2.1)
- libreria C per formati di dati di sequenziamento ad alte prestazioni
-
- dep: liblzma5 (>= 5.1.1alpha+20110809)
- libreria per compressione in formato XZ
-
- dep: libssl1.1 (>= 1.1.0)
- toolkit Secure Sockets Layer - librerie condivise
-
- dep: python
- linguaggio interattivo di alto livello orientato agli oggetti (versione Python 2)
- dep: python (<< 2.8)
- dep: python (>= 2.7~)
-
- dep: python-numpy (>= 1:1.16.0~rc1)
- aggiunge una veloce struttura per array al linguaggio Python
-
- dep: python-numpy-abi9
- virtual package provided by python-numpy
-
- dep: zlib1g (>= 1:1.1.4)
- libreria di compressione - runtime
-
- sug: python-cyvcf2-doc
- Package not available
Download python-cyvcf2
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
amd64 | 779.2 kB | 4,566.0 kB | [list of files] |
arm64 | 734.6 kB | 4,524.0 kB | [list of files] |
armhf | 755.7 kB | 4,310.0 kB | [list of files] |
i386 | 753.9 kB | 4,575.0 kB | [list of files] |