[ Source: sibelia ]
Package: sibelia (3.0.7+dfsg-3 and others)
Links for sibelia
Debian Resources:
Download Source Package sibelia:
Maintainers:
External Resources:
- Homepage [bioinf.spbau.ru]
Similar packages:
comparative genomics tool
Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms.
Sibelia is useful in finding:
1) shared regions, 2) regions that present in one group of genomes but not in others, 3) rearrangements that transform one genome to other genomes.
Other Packages Related to sibelia
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- dep: lagan
- highly parametrizable pairwise global genome sequence aligner
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.17) [ppc64el]
- dep: libc6 (>= 2.34) [arm64, riscv64]
- dep: libc6 (>= 2.4) [not amd64, arm64, ppc64el, riscv64]
-
- dep: libdivsufsort3 (>= 2.0.1)
- fast suffix array construction
-
- dep: libgcc-s1 (>= 3.0) [not armel, armhf, riscv64]
- GCC támogató programkönyvtár
- dep: libgcc-s1 (>= 3.4) [riscv64]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
-
- dep: libstdc++6 (>= 13.1) [riscv64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 14) [arm64]
- dep: libstdc++6 (>= 9) [not arm64, riscv64]
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- sug: sibelia-examples
- comparative genomics tool (example data)
Download sibelia
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| amd64 | 3.0.7+dfsg-3 | 309.7 kB | 1,176.0 kB | [list of files] |
| arm64 | 3.0.7+dfsg-3+b1 | 292.3 kB | 1,229.0 kB | [list of files] |
| armel | 3.0.7+dfsg-3 | 283.4 kB | 1,139.0 kB | [list of files] |
| armhf | 3.0.7+dfsg-3 | 289.5 kB | 955.0 kB | [list of files] |
| i386 | 3.0.7+dfsg-3 | 312.3 kB | 1,151.0 kB | [list of files] |
| mips64el | 3.0.7+dfsg-3 | 278.1 kB | 1,250.0 kB | [list of files] |
| ppc64el | 3.0.7+dfsg-3 | 305.1 kB | 1,228.0 kB | [list of files] |
| riscv64 | 3.0.7+dfsg-3+b1 | 302.4 kB | 1,069.0 kB | [list of files] |
| s390x | 3.0.7+dfsg-3 | 275.7 kB | 1,128.0 kB | [list of files] |