Paketti: clustalw (2.1+lgpl-6)

Links for clustalw

Debian-palvelut:

Imuroi lähdekoodipaketti clustalw:

Ylläpitäjät:

External Resources:

Kotisivu [www.clustal.org]

Samankaltaisia paketteja:

global multiple nucleotide or peptide sequence alignment

This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.

The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.

Tagit: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c++, interface::commandline, User Interface: Text-based Interactive, Role: role::program, scope::utility, Purpose: Comparing, Supports Format: works-with-format::plaintext, works-with::TODO

Muut pakettiin clustalw liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.14)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgcc1 (>= 1:3.0)

GCC:n apukirjasto
dep: libstdc++6 (>= 5.2)

GNU standardi C++ -kirjasto, versio 3

sug: clustalx

Multiple alignment of nucleic acid and protein sequences (graphical interface)
sug: seaview

Multiplatform interface for sequence alignment and phylogeny

enh: bioperl-run

BioPerl wrappers: scripts
enh: emboss

European molecular biology open software suite
enh: t-coffee

Multiple Sequence Alignment

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