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[ Source: sprai  ]

Package: sprai (0.9.9.23+dfsg1-3 and others)

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single-pass sequencing read accuracy improver

Sprai is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads. Instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.

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Download sprai

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 0.9.9.23+dfsg1-3 1,476.5 kB1,881.0 kB [list of files]
amd64 0.9.9.23+dfsg1-3 1,477.2 kB1,713.0 kB [list of files]
arm64 0.9.9.23+dfsg1-3 1,473.8 kB1,881.0 kB [list of files]
armel 0.9.9.23+dfsg1-3 1,473.0 kB1,693.0 kB [list of files]
armhf 0.9.9.23+dfsg1-3 1,471.6 kB1,669.0 kB [list of files]
hppa (unofficial port) 0.9.9.23+dfsg1-3 1,475.5 kB1,692.0 kB [list of files]
i386 0.9.9.23+dfsg1-3 1,477.6 kB1,713.0 kB [list of files]
ia64 (unofficial port) 0.9.9.23+dfsg1-2 1,485.0 kB1,738.0 kB [list of files]
m68k (unofficial port) 0.9.9.23+dfsg1-3 1,474.6 kB1,693.0 kB [list of files]
mips64el 0.9.9.23+dfsg1-3 1,477.2 kB1,885.0 kB [list of files]
ppc64 (unofficial port) 0.9.9.23+dfsg1-3 1,477.7 kB1,881.0 kB [list of files]
ppc64el 0.9.9.23+dfsg1-3 1,478.1 kB1,881.0 kB [list of files]
riscv64 0.9.9.23+dfsg1-3 1,474.3 kB1,689.0 kB [list of files]
s390x 0.9.9.23+dfsg1-3 1,476.0 kB1,701.0 kB [list of files]
sh4 (unofficial port) 0.9.9.23+dfsg1-3 1,477.7 kB1,877.0 kB [list of files]
sparc64 (unofficial port) 0.9.9.23+dfsg1-3 1,474.5 kB5,722.0 kB [list of files]
x32 (unofficial port) 0.9.9.23+dfsg1-3 1,476.4 kB1,705.0 kB [list of files]