[ Source: covtobed ]
Package: covtobed (1.2.0+dfsg-1)
Links for covtobed
Debian Resources:
Download Source Package covtobed:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
convert the coverage track from a BAM file into a BED file
Reads one (or more) alignment files (sorted BAM) and prints a BED with the coverage. It will join consecutive bases with the same coverage, and can be used to only print a BED file with the regions having a specific coverage range.
Other Packages Related to covtobed
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- dep: bamtools
- toolkit for manipulating BAM (genome alignment) files
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- dep: libbamtools2.5.1 (>= 2.5.1+dfsg)
- dynamic library for manipulating BAM (genome alignment) files
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.4) [not amd64, arm64, ppc64el]
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- dep: libgcc-s1 (>= 3.0) [not armel, armhf]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: zlib1g
- compression library - runtime
Download covtobed
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 44.8 kB | 137.0 kB | [list of files] |
| arm64 | 39.7 kB | 121.0 kB | [list of files] |
| armel | 40.3 kB | 120.0 kB | [list of files] |
| armhf | 41.8 kB | 92.0 kB | [list of files] |
| i386 | 48.5 kB | 144.0 kB | [list of files] |
| mips64el | 43.4 kB | 155.0 kB | [list of files] |
| mipsel | 43.8 kB | 149.0 kB | [list of files] |
| ppc64el | 45.5 kB | 209.0 kB | [list of files] |
| s390x | 40.7 kB | 133.0 kB | [list of files] |