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[ Quellcode: pbalign ]
Paket: python-pbalign (0.3.2-1)
Links für python-pbalign
Debian-Ressourcen:
Quellcode-Paket pbalign herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
map Pacific Biosciences reads to reference DNA sequences (Python2)
pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format.
pbalign is part of the SMRTAnalysis suite. This package provides the Python library backend.
Andere Pakete mit Bezug zu python-pbalign
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- dep: blasr (>= 5.3+0)
- mapping single-molecule sequencing reads
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- dep: python
- Interaktive objektorientierte Hochsprache (Python2-Version)
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- dep: python-pbcommand
- common command-line interface for Pacific Biosciences analysis modules
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- dep: python-pbcore
- Python 2 library for processing PacBio data files
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- dep: python-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 2)
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- rec: hdf5-tools
- Hierarchisches Datenformat 5 (HDF5) - Laufzeitprogramme
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- rec: python-pbh5tools
- tools for manipulating Pacific Biosciences HDF5 files -- Python 2 library
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- sug: bowtie2
- Ultraschnelles und speichersparendes Alignmentprogramm für kurze DNA-Sequenzen
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- sug: gmap
- spliced and SNP-tolerant alignment for mRNA and short reads
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- sug: pbalign-doc
- documentation for pbalign
python-pbalign herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 36,5 kB | 224,0 kB | [Liste der Dateien] |