[ Quellcode: spaln ]
Paket: spaln (2.4.1+dfsg-3)
Links für spaln
Debian-Ressourcen:
Quellcode-Paket spaln herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [www.genome.ist.i.kyoto-u.ac.jp]
Ähnliche Pakete:
splicing-aware transcript-alignment to genomic DNA
Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query.
spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer.
Andere Pakete mit Bezug zu spaln
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- dep: libc6 (>= 2.29)
- GNU-C-Bibliothek: Laufzeitbibliotheken
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libgcc-s1 (>= 3.5)
- GCC Support-Bibliothek
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- dep: libstdc++6 (>= 5)
- GNU-Implementierung der Standard-C++-Bibliothek (Version 3)
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- dep: spaln-data
- splicing-aware transcript-alignment to genomic DNA (data)
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- dep: zlib1g (>= 1:1.2.0.2)
- Kompressions-Bibliothek - Laufzeit
spaln herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| armel | 296,6 kB | 781,0 kB | [Liste der Dateien] |