Alle Optionen
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Quellcode: gmap  ]

Paket: gmap (2021-02-22+ds-1)

Links für gmap

Screenshot

Debian-Ressourcen:

Quellcode-Paket gmap herunterladen:

Betreuer:

Externe Ressourcen:

Ähnliche Pakete:

spliced and SNP-tolerant alignment for mRNA and short reads

This package contains the programs GMAP and GSNAP as well as utilities to manage genome databases in GMAP/GSNAP format. GMAP (Genomic Mapping and Alignment Program) is a tool for aligning EST, mRNA and cDNA sequences. GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for aligning single-end and paired-end transcriptome reads. Both tools can use a database of

 * known splice sites and identify novel splice sites.
 * known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.

Markierungen: Feld: Biologie, field::biology:bioinformatics, field::biology:structural, Rolle: Programm, Zweck: Analyse

Andere Pakete mit Bezug zu gmap

  • hängt ab von
  • empfiehlt
  • schlägt vor
  • erweitert

gmap herunterladen

Download für alle verfügbaren Architekturen
Architektur Paketgröße Größe (installiert) Dateien
armel 5.605,3 kB43.621,0 kB [Liste der Dateien]