[ Quellcode: gmap ]
Paket: gmap (2021-02-22+ds-1)
Links für gmap
Debian-Ressourcen:
Quellcode-Paket gmap herunterladen:
Betreuer:
- Debian Med Packaging Team (QS-Seite, E-Mail-Archiv)
- Shaun Jackman (QS-Seite)
- Andreas Tille (QS-Seite)
- Alexandre Mestiashvili (QS-Seite)
- Nilesh Patra (QS-Seite)
Externe Ressourcen:
- Homepage [research-pub.gene.com]
Ähnliche Pakete:
spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as utilities to manage genome databases in GMAP/GSNAP format. GMAP (Genomic Mapping and Alignment Program) is a tool for aligning EST, mRNA and cDNA sequences. GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for aligning single-end and paired-end transcriptome reads. Both tools can use a database of
* known splice sites and identify novel splice sites. * known single-nucleotide polymorphisms (SNPs).GSNAP can align bisulfite-treated DNA.
Andere Pakete mit Bezug zu gmap
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- dep: libbz2-1.0
- Hochwertiger, Blöcke sortierender Dateikomprimierer - Laufzeitbibliothek
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- dep: libc6 (>= 2.29)
- GNU-C-Bibliothek: Laufzeitbibliotheken
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: perl
- Larry Wall's Practical Extraction und Report Language
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- dep: zlib1g (>= 1:1.2.6)
- Kompressions-Bibliothek - Laufzeit
gmap herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| armel | 5.605,3 kB | 43.621,0 kB | [Liste der Dateien] |