Paket: libseqlib-dev (1.2.0+dfsg-9)
Links für libseqlib-dev
Debian-Ressourcen:
Quellcode-Paket libseqlib herunterladen:
- [libseqlib_1.2.0+dfsg-9.dsc]
- [libseqlib_1.2.0+dfsg.orig.tar.xz]
- [libseqlib_1.2.0+dfsg-9.debian.tar.xz]
Betreuer:
- Debian Med Packaging Team (QS-Seite, E-Mail-Archiv)
- Andreas Tille (QS-Seite)
- Étienne Mollier (QS-Seite)
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
This package contains the header files and static library.
Andere Pakete mit Bezug zu libseqlib-dev
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- dep: libbwa-dev
- Burrows-Wheeler Aligner source files
-
- dep: libfml-dev
- development headers for libfml
-
- dep: libhts-dev
- C-Bibliothek für Hochdurchsatz-Sequenzierungsdatenformate - Entwicklungsdateien
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- dep: libjsoncpp-dev
- C++-Bibliothek zum Lesen und Schreiben von JSON - Entwicklungsdateien
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- dep: libseqlib2 (= 1.2.0+dfsg-9)
- C++ htslib/bwa-mem/fermi interface for interrogating sequence data
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- dep: libssw-dev
- Development headers and static libraries for libssw
auch ein virtuelles Paket, bereitgestellt durch libssw-dev
-
- dep: zlib1g-dev
- Kompressionsbibliothek - Entwicklung
libseqlib-dev herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 204,5 kB | 1.166,0 kB | [Liste der Dateien] |
| arm64 | 197,4 kB | 1.162,0 kB | [Liste der Dateien] |
| armel | 198,5 kB | 1.082,0 kB | [Liste der Dateien] |
| armhf | 201,1 kB | 983,0 kB | [Liste der Dateien] |
| i386 | 218,3 kB | 1.011,0 kB | [Liste der Dateien] |
| mips64el | 221,2 kB | 1.408,0 kB | [Liste der Dateien] |
| mipsel | 218,3 kB | 1.089,0 kB | [Liste der Dateien] |
| ppc64el | 220,0 kB | 1.285,0 kB | [Liste der Dateien] |
| s390x | 188,5 kB | 1.170,0 kB | [Liste der Dateien] |