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[ Source: htslib  ]

Package: tabix (1.20+ds-1 and others)

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Generisk indeksprogram for TAB-afgrænsede arvemassepositionsfiler

Tabix indekserer filer hvor nogle kolonner indikerer sekvenskoordinater: navn (normalt et kromosom), start og stop. Inddatafilen skal være positionssorteret og komprimeret af bgzip (tilbudt i denne pakke), som har en grænseflade der ligner gzip. Efter indeksering er tabix i stand til hurtigt at hente datalinjer efter kromosomkoordinater. Hurtig dataindhentelse fungerer også over netværk hvis en URI angives som et filnavn.

Denne pakke er bygget fra HTSlib-kilden, og tilbyder værktøjerne for bgzip, htsfile og tabix.

Tags: Implemented in: C, Role: Program, Science: science::calculation, use::calculating, Supports Format: HTML, Hypertext Markup Language, Works with: Text

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Download tabix

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 1.20+ds-1 478.0 kB2,700.0 kB [list of files]
amd64 1.20+ds-1 471.4 kB2,249.0 kB [list of files]
arm64 1.20+ds-1 438.8 kB2,249.0 kB [list of files]
armel 1.20+ds-1 401.4 kB2,062.0 kB [list of files]
armhf 1.20+ds-1 404.8 kB1,494.0 kB [list of files]
hppa (unofficial port) 1.20+ds-1 461.7 kB2,282.0 kB [list of files]
i386 1.20+ds-1 517.3 kB2,566.0 kB [list of files]
ia64 (unofficial port) 1.19+ds-1.1+b1 558.6 kB4,599.0 kB [list of files]
m68k (unofficial port) 1.20+ds-1 435.0 kB2,078.0 kB [list of files]
mips64el 1.20+ds-1 430.6 kB2,618.0 kB [list of files]
ppc64 (unofficial port) 1.20+ds-1 494.7 kB3,145.0 kB [list of files]
ppc64el 1.20+ds-1 508.1 kB3,017.0 kB [list of files]
riscv64 1.20+ds-1 488.8 kB1,893.0 kB [list of files]
s390x 1.20+ds-1 462.5 kB2,465.0 kB [list of files]
sh4 (unofficial port) 1.20+ds-1 493.9 kB1,993.0 kB [list of files]
sparc64 (unofficial port) 1.20+ds-1 402.4 kB3,160.0 kB [list of files]
x32 (unofficial port) 1.20+ds-1 473.0 kB2,198.0 kB [list of files]