[ Source: quicktree ]
Package: libquicktree-dev (2.5-6 and others)
Links for libquicktree-dev
Debian Resources:
Download Source Package quicktree:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
Neighbor-Joining-algoritme for fylogenier - udvikling
Quicktree er en effektiv implementering af Neighbor-Joining-algoritmen (PMID: 3447015), der kan rekonstruere fylogenier fra store sammenligninger i tid mindre end universets alder.
QuickTree accepterer både afstandsmatrix og data fra multiple-sequence-alignment. Den første skal være i PHYLIP-format. Den sidste skal være i Stockholm-format, der er standardformet for sammenligning for Pfam-databasen. Sammenligninger i forskellige formater kan konverteres til Stockholm-formatet via programmet sreformat, der er en del af pakken HMMer (hmmer.org).
Tress skrives til standardud, i Newick/New-Hampshire-formatet brugt af PHYLIP og mange andre programmer.
Denne pakke indeholder nogle teksthoveder fra quicktree, der bruges af andre pakker.
Download libquicktree-dev
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 2.5-6 | 27.8 kB | 151.0 kB | [list of files] |
| amd64 | 2.5-6 | 25.5 kB | 122.0 kB | [list of files] |
| arm64 | 2.5-6 | 24.6 kB | 122.0 kB | [list of files] |
| armel | 2.5-6 | 23.1 kB | 109.0 kB | [list of files] |
| armhf | 2.5-6 | 22.6 kB | 100.0 kB | [list of files] |
| hppa (unofficial port) | 2.5-6 | 24.6 kB | 111.0 kB | [list of files] |
| i386 | 2.5-6 | 26.2 kB | 116.0 kB | [list of files] |
| ia64 (unofficial port) | 2.5-6 | 29.6 kB | 152.0 kB | [list of files] |
| m68k (unofficial port) | 2.5-6 | 22.1 kB | 106.0 kB | [list of files] |
| mips64el | 2.5-6 | 26.7 kB | 140.0 kB | [list of files] |
| ppc64 (unofficial port) | 2.5-6 | 28.0 kB | 136.0 kB | [list of files] |
| ppc64el | 2.5-6 | 28.2 kB | 133.0 kB | [list of files] |
| riscv64 | 2.5-6+b1 | 43.1 kB | 341.0 kB | [list of files] |
| s390x | 2.5-6 | 25.5 kB | 124.0 kB | [list of files] |
| sh4 (unofficial port) | 2.5-6 | 24.6 kB | 102.0 kB | [list of files] |
| sparc64 (unofficial port) | 2.5-6 | 23.5 kB | 122.0 kB | [list of files] |
| x32 (unofficial port) | 2.5-6 | 25.5 kB | 113.0 kB | [list of files] |