all options
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Source: murasaki  ]

Package: murasaki-mpi (1.68.6-12)

Links for murasaki-mpi

Screenshot

Debian Resources:

Download Source Package murasaki:

Maintainers:

External Resources:

Similar packages:

homology detection tool across multiple large genomes (MPI-version)

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

This package provides the MPI-enabled binary for murasaki. While this will speed up operation on multi-processor machines it will slow down on a single processor.

Other Packages Related to murasaki-mpi

  • depends
  • recommends
  • suggests
  • enhances

Download murasaki-mpi

Download for all available architectures
Architecture Package Size Installed Size Files
ppc64el 627.7 kB5,202.0 kB [list of files]