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Пакет-източник: snpeff (5.1+d+dfsg-3)

Връзки за snpeff

Ресурси за Debian:

Отговорници:

Външни препратки:

Начална страница [pcingola.github.io]

Следните двоични пакети са компилирани от този пакет-източник:

libsnpeff-java: genetic variant annotation and effect prediction toolbox - lib
libsnpeff-java-doc: Documentation for Snp Effect
snpeff: genetic variant annotation and effect prediction toolbox - tool

Други пакети, свързани с snpeff

зависимости при компилиране

зависимости при компилиране (архитектурно-независими)

adep: debhelper-compat (= 13)

Пакетът не е наличен
adep: javahelper

Helper scripts for packaging Java programs
adep: default-jdk

Standard Java or Java compatible Development Kit
adep: default-jdk-doc

Standard Java or Java compatible Development Kit (documentation)
adep: maven-debian-helper

Helper tools for building Debian packages with Maven
adep: libmaven-assembly-plugin-java

Maven Assembly Plugin
adep: libtrove3-java

high performance collections for java
adep: libhtsjdk-java

Java API for high-throughput sequencing data (HTS) formats
adep: libbiojava6-java

Java API to biological data and applications (version 6)
adep: junit5

JUnit regression test framework for Java
adep: libcommons-codec-java

encoder and decoders such as Base64 and hexadecimal codec
adep: libcommons-io-java

Common useful IO related classes
adep: libcommons-cli-java

Command line arguments and options parsing library
adep: libcommons-math3-java

Java lightweight mathematics and statistics components
adep: libfreemarker-java

template engine written in Java
adep: libjaxb-api-java

Java Architecture for XML Binding API
adep: libmaven-javadoc-plugin-java

Maven Javadoc Plugin
adep: libbiojava6-java-doc

[Biology] Documentation for BioJava 6
adep: libtrove3-java-doc

high performance collections for java
adep: libcharts4j-java

free, lightweight charts and graphs Java API
adep: libapfloat-java

high performance arbitrary precision arithmetic library for Java
adep: libdistlib-java

Java library of statistical distribution functions

Download snpeff

Файл	Големина (в кБ)	контролна сума MD5
snpeff_5.1+d+dfsg-3.dsc	2,5 кБ	a223df2b7a1103cc2f0a9ec9baf49ee2
snpeff_5.1+d+dfsg.orig.tar.xz	131 587,5 кБ	2124876a86ba3d0af6b26bf6faaf26fa
snpeff_5.1+d+dfsg-3.debian.tar.xz	13,9 кБ	78da84bbf07cf75de09203f390622619

Хранилище на изходния код на пакета (СКП: Git): https://salsa.debian.org/med-team/snpeff.git
Хранилище на изходния код на пакета (за разглеждане през браузър): https://salsa.debian.org/med-team/snpeff