Пакет: bedtools (2.30.0+dfsg-3)

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Начална страница [github.com]

Подобни пакети:

suite of utilities for comparing genomic features

The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distributed in the filo package.

Етикети: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Suite, Purpose: use::analysing, use::comparing, Data Conversion, use::filtering, works-with::biological-sequence

Други пакети, свързани с bedtools

зависимости

препоръчани

предложени

enhances

dep: libbz2-1.0

high-quality block-sorting file compressor library - runtime
dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb
dep: libgcc-s1 (>= 4.2)

GCC support library
dep: liblzma5 (>= 5.1.1alpha+20120614)

XZ-format compression library
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3
dep: zlib1g (>= 1:1.2.0)

compression library - runtime

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ppc64el	666,0 кБ	2 517,0 кБ	[списък на файловете]