[ 原始碼： r-bioc-grohmm ]
套件：r-bioc-grohmm（1.36.0-1 以及其他的）
r-bioc-grohmm 的相關連結
Debian 的資源：
下載原始碼套件 r-bioc-grohmm：
- [r-bioc-grohmm_1.36.0-1.dsc]
- [r-bioc-grohmm_1.36.0.orig.tar.gz]
- [r-bioc-grohmm_1.36.0-1.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [bioconductor.org]
相似套件：
GRO-seq Analysis Pipeline
This BioConductor package provides a pipeline for the analysis of GRO- seq data. Among the more advanced features, r-bioc-grohmm predicts the boundaries of transcriptional activity across the genome de novo using a two-state hidden Markov model (HMM).
The used model essentially divides the genome into transcribed and non- transcribed regions in a strand specific manner. HMMs are used to identify the leading edge of Pol II at genes activated by a stimulus in GRO-seq time course data. This approach allows the genome-wide interrogation of transcription rates in cells.
其他與 r-bioc-grohmm 有關的套件
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- dep: libc6 (>= 2.16) [x32]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.2) [hppa]
- dep: libc6 (>= 2.27) [riscv64]
- dep: libc6 (>= 2.37) [sh4]
- dep: libc6 (>= 2.4) [amd64, mips64el, ppc64, s390x]
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- dep: libc6.1 (>= 2.1.3) [alpha]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-api-bioc-3.16 [x32]
- 套件暫時不可用
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- dep: r-api-bioc-3.18 [除 x32]
- 本虛擬套件由這些套件填實： r-bioc-biocgenerics
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- dep: r-base-core (>= 4.2.2.20221110-1) [x32]
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-genomeinfodb
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicalignments (>= 1.15.6)
- BioConductor representation and manipulation of short genomic alignments
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- dep: r-bioc-genomicranges (>= 1.31.8)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.13.12)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rtracklayer (>= 1.39.7)
- GNU R interface to genome browsers and their annotation tracks
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- dep: r-bioc-s4vectors (>= 0.17.25)
- BioConductor S4 implementation of vectors and lists
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- dep: r-cran-mass
- GNU R package of Venables and Ripley's MASS
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- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
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- sug: r-bioc-edger
- Empirical analysis of digital gene expression data in R
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- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
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- sug: r-bioc-org.hs.eg.db
- genome-wide annotation for Human
下載 r-bioc-grohmm
| 硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
|---|---|---|---|---|
| alpha （非官方移植版） | 1.36.0-1 | 4，343。2 kB | 4，523。0 kB | [檔案列表] |
| amd64 | 1.36.0-1 | 4，342。9 kB | 4，515。0 kB | [檔案列表] |
| arm64 | 1.36.0-1 | 4，340。8 kB | 4，523。0 kB | [檔案列表] |
| hppa （非官方移植版） | 1.36.0-1 | 4，343。5 kB | 4，516。0 kB | [檔案列表] |
| ia64 （非官方移植版） | 1.36.0-1 | 4，349。2 kB | 4，558。0 kB | [檔案列表] |
| mips64el | 1.36.0-1 | 4，340。4 kB | 4，526。0 kB | [檔案列表] |
| ppc64 （非官方移植版） | 1.36.0-1 | 4，346。3 kB | 4，588。0 kB | [檔案列表] |
| ppc64el | 1.36.0-1 | 4，346。4 kB | 4，523。0 kB | [檔案列表] |
| riscv64 | 1.36.0-1 | 4，342。6 kB | 4，499。0 kB | [檔案列表] |
| s390x | 1.36.0-1 | 4，344。1 kB | 4，515。0 kB | [檔案列表] |
| sh4 （非官方移植版） | 1.36.0-1 | 4，344。3 kB | 4，522。0 kB | [檔案列表] |
| x32 （非官方移植版） | 1.32.0-1 | 4，332。9 kB | 4，498。0 kB | [檔案列表] |