全部搜尋項
bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ 原始碼: bbmap  ]

套件:bbmap(39.09+dfsg-1)

bbmap 的相關連結

Screenshot

Debian 的資源:

下載原始碼套件 bbmap

維護小組:

外部的資源:

相似套件:

BBTools genomic aligner and other tools for short sequences

The BBTools are a collection of small programs to solve recurrent tasks for the creative handling of short biological RNA/DNA sequences. This suite may be best known for its mapper, which is also the name of the project on sourceforge, but several tools have been added over time. All tools are multi-threaded, implemented platform-independently in Java:

BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and tolerant of errors and numerous large indels.

BBNorm: Kmer-based error-correction and normalization tool.

Dedupe: Simplifies assemblies by removing duplicate or contained subsequences that share a target percent identity.

Reformat: Reformats reads between fasta/fastq/scarf/fasta+qual/sam, interleaved/paired, and ASCII-33/64, at over 500 MB/s.

BBDuk: Filters, trims, or masks reads with kmer matches to an artifact/contaminant file.

其他與 bbmap 有關的套件

  • 依賴
  • 推薦
  • 建議
  • 增強

下載 bbmap

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
all 9,996。2 kB10,892。0 kB [檔案列表]