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[ 原始碼: bifrost  ]

套件:libbifrost0(1.3.1-1)

libbifrost0 的相關連結

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下載原始碼套件 bifrost

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library for parallel construction, indexing and querying of de Bruijn graphs

Libbifrost is the shared library for the command-line tool bifrost for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.

 * Build, index, color and query the compacted de Bruijn graph
 * No need to build the uncompacted de Bruijn graph
 * Reads or assembled genomes as input
 * Output graph in GFA (can be visualized with Bandage), FASTA or binary
 * Graph cleaning: short tip clipping, etc.
 * Multi-threaded
 * No parameters to estimate with other tools
 * Exact or approximate k-mer search of queries

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下載 libbifrost0

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
alpha (非官方移植版) 388。7 kB1,526。0 kB [檔案列表]
amd64 417。9 kB1,436。0 kB [檔案列表]
arm64 369。5 kB1,324。0 kB [檔案列表]
ia64 (非官方移植版) 509。9 kB2,582。0 kB [檔案列表]
mips64el 350。8 kB1,504。0 kB [檔案列表]
ppc64 (非官方移植版) 428。4 kB1,773。0 kB [檔案列表]
ppc64el 435。0 kB1,644。0 kB [檔案列表]
riscv64 424。2 kB1,128。0 kB [檔案列表]
s390x 430。1 kB1,524。0 kB [檔案列表]
sparc64 (非官方移植版) 354。0 kB2,125。0 kB [檔案列表]