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[ 原始碼: iqtree  ]

套件:iqtree(2.0.7+dfsg-1 以及其他的)

iqtree 的相關連結

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Debian 的資源:

下載原始碼套件 iqtree

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外部的資源:

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efficient phylogenetic software by maximum likelihood

IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others:

 * A novel fast and effective stochastic algorithm to estimate maximum
   likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms
   of likelihood while requiring similar amount of computing time (see
   Nguyen et al., 2015)
 * An ultrafast bootstrap approximation to assess branch supports (see
   Minh et al., 2013).
 * A wide range of substitution models for binary, DNA, protein, codon,
   and morphological alignments.
 * Ultrafast model selection for all data types, 10 to 100 times faster
   than jModelTest and ProtTest.
 * Finding best partition scheme like PartitionFinder.
 * Partitioned models with mixed data types for phylogenomic (multi-
   gene) alignments, allowing for separate, proportional, or joint
   branch lengths among genes.
 * Supporting the phylogenetic likelihod library (PLL) (see Flouri et
   al., 2014)

其他與 iqtree 有關的套件

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  • 增強

下載 iqtree

下載可用於所有硬體架構的
硬體架構 版本 套件大小 安裝後大小 檔案
i386 2.0.7+dfsg-1+b2 3,153。6 kB22,295。0 kB [檔案列表]