[ 原始碼: libedlib ]
套件:edlib-aligner(1.2.7-5)
edlib sequence alignment tool using edit distance
Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.
Features of libedlib
* Calculates edit distance (Levehnstein distance). * It can find optimal alignment path (instructions how to transform first sequence into the second sequence). * It can find just the start and/or end locations of alignment path - can be useful when speed is more important than having exact alignment path. * Supports multiple alignment methods: global(NW), prefix(SHW) and infix(HW), each of them useful for different scenarios. * You can extend character equality definition, enabling you to e.g. have wildcard characters, to have case insensitive alignment or to work with degenerate nucleotides. * It can easily handle small or very large sequences, even when finding alignment path, while consuming very little memory. * Super fast thanks to Myers's bit-vector algorithm.
其他與 edlib-aligner 有關的套件
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- dep: libc6 (>= 2.34) [除 alpha, ia64, sh4]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
- dep: libc6 (>= 2.37) [sh4]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
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- dep: libedlib1 (= 1.2.7-5)
- library for sequence alignment using edit distance
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- dep: libgcc-s1 (>= 3.0) [除 armel, armhf, hppa, ia64, m68k]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC 支援函式庫
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- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC 支援函式庫
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
下載 edlib-aligner
硬體架構 | 套件大小 | 安裝後大小 | 檔案 |
---|---|---|---|
alpha (非官方移植版) | 22。1 kB | 86。0 kB | [檔案列表] |
amd64 | 24。1 kB | 66。0 kB | [檔案列表] |
arm64 | 22。4 kB | 86。0 kB | [檔案列表] |
armel | 19。8 kB | 53。0 kB | [檔案列表] |
armhf | 19。9 kB | 49。0 kB | [檔案列表] |
hppa (非官方移植版) | 22。6 kB | 58。0 kB | [檔案列表] |
i386 | 23。1 kB | 65。0 kB | [檔案列表] |
ia64 (非官方移植版) | 27。5 kB | 86。0 kB | [檔案列表] |
m68k (非官方移植版) | 22。7 kB | 61。0 kB | [檔案列表] |
mips64el | 22。9 kB | 87。0 kB | [檔案列表] |
ppc64 (非官方移植版) | 24。9 kB | 86。0 kB | [檔案列表] |
ppc64el | 27。5 kB | 86。0 kB | [檔案列表] |
riscv64 | 22。4 kB | 54。0 kB | [檔案列表] |
s390x | 26。5 kB | 74。0 kB | [檔案列表] |
sh4 (非官方移植版) | 24。5 kB | 85。0 kB | [檔案列表] |
sparc64 (非官方移植版) | 20。5 kB | 1,047。0 kB | [檔案列表] |
x32 (非官方移植版) | 24。1 kB | 65。0 kB | [檔案列表] |