套件：mauve-aligner（2.4.0+4736-3）
mauve-aligner 的相關連結
Debian 的資源：
下載原始碼套件 mauve-aligner：
- [mauve-aligner_2.4.0+4736-3.dsc]
- [mauve-aligner_2.4.0+4736.orig.tar.xz]
- [mauve-aligner_2.4.0+4736-3.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [darlinglab.org]
相似套件：
multiple genome alignment
Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignment provides a basis for research into comparative genomics and the study of evolutionary dynamics. Aligning whole genomes is a fundamentally different problem than aligning short sequences.
Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the amount of sequence being aligned. For example, a pair of Y. pestis genomes can be aligned in under a minute, while a group of 9 divergent Enterobacterial genomes can be aligned in a few hours.
Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutition.
Mauve is developed at the University of Wisconsin.
其他與 mauve-aligner 有關的套件
|
|
|
|
-
- dep: java-wrappers
- wrappers for java executables
-
- dep: libbiojava-java
- Java API to biological data and applications (default version)
-
- dep: libbiojava1.7-java
- Java API to biological data and applications (version 1.7)
-
- dep: libcommons-cli-java
- Command line arguments and options parsing library
-
- dep: libdbus-java
- simple interprocess messaging system (Java implementation)
-
- dep: libunixsocket-java
- Unix socket API and bindings for Java
-
- dep: libzeus-jscl-java
- Zeus Java Swing Components Library
-
- dep: progressivemauve
- multiple genome alignment algorithms