套件:python3-dna-jellyfish(2.3.0-15 以及其他的)
python3-dna-jellyfish 的相關連結
Debian 的資源:
下載原始碼套件 jellyfish:
維護小組:
- Debian Med Packaging Team (QA 頁面, 郵件存檔)
- Shaun Jackman (QA 頁面)
- Andreas Tille (QA 頁面)
- Michael R. Crusoe (QA 頁面)
- Étienne Mollier (QA 頁面)
外部的資源:
- 主頁 [github.com]
相似套件:
count k-mers in DNA sequences (Python bindings of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.
This package contains the Python bindings of jellyfish.
其他與 python3-dna-jellyfish 有關的套件
|
|
|
|
-
- dep: libc6 (>= 2.34)
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
-
- dep: libgcc-s1 (>= 3.0) [除 armel, armhf, i386]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [i386]
-
- dep: libjellyfish-2.0-2 (>= 2.3.0)
- count k-mers in DNA sequences (dynamic library of jellyfish)
-
- dep: libstdc++6 (>= 5.2) [armel, armhf]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 9) [除 armel, armhf]
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.12)
- dep: python3 (>= 3.11~)
下載 python3-dna-jellyfish
硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
---|---|---|---|---|
amd64 | 2.3.0-15+b3 | 52。1 kB | 175。0 kB | [檔案列表] |
arm64 | 2.3.0-15+b3 | 49。6 kB | 171。0 kB | [檔案列表] |
armel | 2.3.0-15+b3 | 51。9 kB | 168。0 kB | [檔案列表] |
armhf | 2.3.0-15+b3 | 52。8 kB | 140。0 kB | [檔案列表] |
i386 | 2.3.0-15+b3 | 60。5 kB | 184。0 kB | [檔案列表] |
mips64el | 2.3.0-15+b3 | 50。5 kB | 242。0 kB | [檔案列表] |
ppc64el | 2.3.0-15+b3 | 55。1 kB | 235。0 kB | [檔案列表] |