[ 源代码： r-bioc-shortread ]
软件包：r-bioc-shortread（1.60.0-2）
r-bioc-shortread 的相关链接
Debian 的资源：
下载源码包 r-bioc-shortread：
- [r-bioc-shortread_1.60.0-2.dsc]
- [r-bioc-shortread_1.60.0.orig.tar.gz]
- [r-bioc-shortread_1.60.0-2.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [bioconductor.org]
相似软件包：
GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.
其他与 r-bioc-shortread 有关的软件包
|
|
|
|
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.7) [mips64el, s390x]
-
- dep: libgcc-s1 (>= 3.0)
- GCC 支持库
-
- dep: libstdc++6 (>= 11)
- GNU 标准 C++ 库，第3版
-
- dep: r-api-4.0
- 本虚包由这些包填实： r-base-core
-
- dep: r-api-bioc-3.18
- 本虚包由这些包填实： r-bioc-biocgenerics
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.23.3)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.47.6)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomeinfodb (>= 1.15.2)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicalignments (>= 1.15.6)
- BioConductor representation and manipulation of short genomic alignments
-
- dep: r-bioc-genomicranges (>= 1.31.8)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.13.12)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rhtslib
- HTSlib high-throughput sequencing library as GNU R package
-
- dep: r-bioc-rsamtools (>= 1.31.2)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-s4vectors (>= 0.17.25)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-xvector
- BioConductor representation and manpulation of external sequences
-
- dep: r-bioc-zlibbioc
- (Virtual) zlibbioc Bioconductor package
-
- dep: r-cran-hwriter
- HTML Writer - Outputs R objects in HTML format
-
- dep: r-cran-lattice
- GNU R package for 'Trellis' graphics
-
- dep: r-cran-latticeextra
- GNU R package of additional graphical displays based on lattice
-
- dep: zlib1g (>= 1:1.1.4)
- 压缩库 - 运行时
-
- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
-
- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- sug: r-cran-runit
- GNU R package providing unit testing framework