[ 源代码： gasic ]
软件包：gasic（0.0.r19-8）
gasic 的相关链接
Debian 的资源：
下载源码包 gasic：
维护小组：
- Debian Med Packaging Team (QA 页面, 邮件存档)
- Andreas Tille (QA 页面)
- Navid Fehrenbacher (QA 页面)
- Roland Fehrenbacher (QA 页面)
外部的资源：
- 主页 [sourceforge.net]
相似软件包：
genome abundance similarity correction
One goal of sequencing based metagenomic analysis is the quantitative taxonomic assessment of microbial community compositions. However, the majority of approaches either quantify at low resolution (e.g. at phylum level) or have severe problems discerning highly similar species. Yet, accurate quantification on species level is desirable in applications such as metagenomic diagnostics or community comparison. GASiC is a method to correct read alignment results for the ambiguities imposed by similarities of genomes. It has superior performance over existing methods.
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- dep: bowtie2
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- dep: python3
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab
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- dep: python3-numpy
- Fast array facility to the Python language (Python 3)
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: seqan-apps
- C++ library for the analysis of biological sequences
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- sug: gasic-examples
- genome abundance similarity correction (example data)