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[ 源代码: unikmer  ]

软件包:unikmer(0.20.0-1 以及其他的)

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Toolkit for nucleic acid k-mer analysis

unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.

K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.

TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.

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下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
amd64 0.20.0-1+b3 2,999.2 kB9,594.0 kB [文件列表]