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[ sid ]
[ 源代码： python-cooler ]
软件包：python3-cooler（0.9.3-1 以及其他的）
library for a sparse, compressed, binary persistent storage
Cooler is a support library for a sparse, compressed, binary persistent storage format, also called cooler, used to store genomic interaction data, such as Hi-C contact matrices.
The cooler file format is an implementation of a genomic matrix data model using HDF5 as the container format. The cooler package includes a suite of command line tools and a Python API to facilitate creating, querying and manipulating cooler files.
其他与 python3-cooler 有关的软件包
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- dep: python3
- 交互式高级面向对象语言（默认 python3 版本）
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- dep: python3-asciitree
- Draw tree structures using (ASCII or Unicode) characters
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-click
- Wrapper around optparse for command line utilities - Python 3.x
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- dep: python3-cytoolz
- Toolz in Cython: High performance functional utilities
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- dep: python3-h5py (>= 2.5)
- general-purpose Python interface to hdf5
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- dep: python3-multiprocess
- better multiprocessing and multithreading in Python
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- dep: python3-numpy
- Fast array facility to the Python language (Python 3)
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- dep: python3-pairix
- 1D/2D indexing and querying with a pair of genomic coordinates
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- dep: python3-pandas [alpha, ppc64]
- data structures for "relational" or "labeled" data
- dep: python3-pandas (>= 2.1) [除 alpha, ppc64]
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- dep: python3-pyfaidx
- efficient random access to fasta subsequences for Python 3
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-scipy (>= 1.10~)
- scientific tools for Python 3
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- dep: python3-simplejson
- simple, fast, extensible JSON encoder/decoder for Python 3.x
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- dep: python3-six [alpha, ppc64]
- Python 2 and 3 compatibility library
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- dep: python3-yaml
- YAML parser and emitter for Python3
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- rec: python3-dask
- Minimal task scheduling abstraction for Python 3
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- sug: python3-pip
- Python package installer
下载 python3-cooler
| 硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
|---|---|---|---|---|
| alpha （非官方移植版） | 0.9.1-1 | 83.7 kB | 383.0 kB | [文件列表] |
| amd64 | 0.9.3-1 | 82.2 kB | 381.0 kB | [文件列表] |
| arm64 | 0.9.3-1 | 82.2 kB | 381.0 kB | [文件列表] |
| mips64el | 0.9.3-1 | 82.2 kB | 381.0 kB | [文件列表] |
| ppc64 （非官方移植版） | 0.9.1-1 | 83.7 kB | 383.0 kB | [文件列表] |
| ppc64el | 0.9.3-1 | 82.2 kB | 381.0 kB | [文件列表] |
| riscv64 | 0.9.3-1 | 82.2 kB | 381.0 kB | [文件列表] |