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[ 源代码: sibsim4  ]

软件包:sibsim4(0.20-5)

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align expressed RNA sequences on a DNA template

The SIBsim4 project is based on sim4, which is a program designed to align an expressed DNA sequence with a genomic sequence, allowing for introns. SIBsim4 is a fairly extensive rewrite of the original code with the following goals:

 * speed improvement;
 * allow large, chromosome scale, DNA sequences to be used;
 * provide more detailed output about splice types;
 * provide more detailed output about polyA sites;
 * misc code cleanups and fixes.

标签: 领域: 生物学, 生物信息学, 实做语言: implemented-in::c, interface::commandline, 角色: 程序, 范围: 实用程序, Purpose: use::TODO, use::comparing, 搜索, 支持的格式: works-with-format::TODO, works-with-format::plaintext, 处理: 需要一个额外的标签

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ppc64el 31.9 kB85.0 kB [文件列表]