[ 源代码: proteinortho ]
软件包:proteinortho(6.3.1+dfsg-1 以及其他的)
proteinortho 的相关链接
Debian 的资源:
下载源码包 proteinortho:
- [proteinortho_6.3.1+dfsg-1.dsc]
- [proteinortho_6.3.1+dfsg.orig.tar.xz]
- [proteinortho_6.3.1+dfsg-1.debian.tar.xz]
维护小组:
外部的资源:
- 主页 [gitlab.com]
相似软件包:
Detection of (Co-)orthologs in large-scale protein analysis
Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic. Proteinortho was applied to compute orthologous proteins in the complete set of all 717 eubacterial genomes available at NCBI at the beginning of 2009. Authors succeeded identifying thirty proteins present in 99% of all bacterial proteomes.
其他与 proteinortho 有关的软件包
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- dep: diamond-aligner (>= 2.0.10~)
- accelerated BLAST compatible local sequence aligner
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- dep: libc6 (>= 2.38)
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC 支持库
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP(GOMP)支持库
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- dep: liblapack3
- Library of linear algebra routines 3 - shared version
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- dep: libstdc++6 (>= 13.1)
- GNU 标准 C++ 库,第3版
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- dep: ncbi-blast+
- next generation suite of BLAST sequence search tools
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- dep: perl
- 拉里 沃尔的实用报表提取语言(Perl)
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- dep: procps
- /proc 文件系统工具
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- dep: python3
- interactive high-level object-oriented language (default python3 version)