[ 源代码： mash ]
软件包：mash（2.1+dfsg-2）
fast genome and metagenome distance estimation using MinHash
Mash uses MinHash locality-sensitive hashing to reduce large biosequences to a representative sketch and rapidly estimate pairwise distances between genomes or metagenomes. Mash sketch databases effectively delineate known species boundaries, allow construction of approximate phylogenies, and can be searched in seconds using assembled genomes or raw sequencing runs from Illumina, Pacific Biosciences, and Oxford Nanopore. For metagenomics, Mash scales to thousands of samples and can replicate Human Microbiome Project and Global Ocean Survey results in a fraction of the time.
其他与 mash 有关的软件包
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- dep: libc6 (>= 2.14) [amd64]
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
- dep: libc6 (>= 2.17) [arm64]
- dep: libc6 (>= 2.4) [armhf, i386]
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- dep: libcapnp-0.7.0
- Cap'n Proto C++ library
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- dep: libgcc1 (>= 1:3.0) [amd64, arm64]
- GCC 支持库
- dep: libgcc1 (>= 1:3.5) [armhf]
- dep: libgcc1 (>= 1:4.2) [i386]
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- dep: libgsl23 (>= 2.5)
- GNU Scientific Library (GSL) -- library package
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- dep: libgslcblas0 (>= 2.4)
- GNU Scientific Library (GSL) -- blas library package
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- dep: libmurmurhash1 (>= 0.2) [armhf]
- Portable MurmurHash Implementation
- dep: libmurmurhash1 (>= 1.1) [除 armhf]
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- dep: libstdc++6 (>= 5.2)
- GNU 标准 C++ 库，第3版
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- dep: zlib1g (>= 1:1.1.4)
- 压缩库 - 运行时